Transcript: NUTM2B-AS1:17

Basic information

LNCipedia transcript ID: NUTM2B-AS1:17 
LNCipedia gene ID: NUTM2B-AS1
Location (hg38): chr10:79804485-79826353
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000496359; ENST00000496359.1; RP11-773D16.1-006; OTTHUMT00000049003.1; NONHSAT015190
Alternative gene names: ENSG00000225484; RP11-773D16.1; ENSG00000225484.2; OTTHUMG00000018585.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.8383 non-coding 
CPAT coding probability 32.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NUTM2B-AS1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SFTPD-2:5
3.1 lnc-SFTPD-2:5
4.0 NUTM2B-AS1:17
4.1 NUTM2B-AS1:17
5.0 NUTM2B-AS1:17
5.1 NUTM2B-AS1:17
5.2 NUTM2B-AS1:17