Transcript: OTUD6B-AS1:3

Basic information

LNCipedia transcript ID: OTUD6B-AS1:3 
LNCipedia gene ID: OTUD6B-AS1
RefSeq ID: NR_110438
Location (hg38): chr8:91059906-91070189
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 4344 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110438; NR_110438.1
Alternative gene names: GS1-251I9.4; OTUD6B-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
KAECSESGKMLCR 92.3076923076923% antisense-1
Lee translation initiation sites 1 non-coding 
PhyloCSF score -10.1648 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
OTUD6B-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM55A-2:5
4.0 OTUD6B-AS1:3
4.1 OTUD6B-AS1:3
5.0 OTUD6B-AS1:3
5.1 OTUD6B-AS1:3
5.2 OTUD6B-AS1:3