Transcript: P4HA2-AS1:2

Basic information

LNCipedia transcript ID: P4HA2-AS1:2 
HGNC Gene Symbol: P4HA2-AS1    
HGNC Full Gene Name: P4HA2 antisense RNA 1
Ensembl Gene ID: ENSG00000237714
Ensembl Transcript ID: ENST00000417667
Location (hg38): chr5:132184876-132192808
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 839 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000417667.1; P4HA2-AS1-001; OTTHUMT00000132642.1; NONHSAT103722
Alternative gene names: ENSG00000237714.1; P4HA2-AS1; OTTHUMG00000059643.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -248.6714 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
P4HA2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDLIM4-1:2
4.0 P4HA2-AS1:2
4.1 P4HA2-AS1:2
5.0 P4HA2-AS1:2
5.1 P4HA2-AS1:2
5.2 P4HA2-AS1:2