Transcript: P4HA2-AS1:3

Basic information

LNCipedia transcript ID: P4HA2-AS1:3 
LNCipedia gene ID: P4HA2-AS1
RefSeq ID: NR_047470
Location (hg38): chr5:132184876-132192805
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 836 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_047470; NR_047470.1
Alternative gene names: ; P4HA2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -248.6714 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
P4HA2-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDLIM4-1:3
4.0 P4HA2-AS1:3
4.1 P4HA2-AS1:3
5.0 P4HA2-AS1:3
5.1 P4HA2-AS1:3
5.2 P4HA2-AS1:3