Transcript: PAN3-AS1:1

Basic information

LNCipedia transcript ID: PAN3-AS1:1 
LNCipedia gene ID: PAN3-AS1
Location (hg38): chr13:28136847-28139174
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2187 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501459
Alternative gene names: ENSG00000245799;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.1646 non-coding 
CPAT coding probability 84.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PAN3-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FLT3-1:1
3.1 lnc-FLT3-1:1
4.0 PAN3-AS1:1
4.1 PAN3-AS1:1
5.0 PAN3-AS1:1
5.1 PAN3-AS1:1
5.2 PAN3-AS1:1