Transcript: PAN3-AS1:6

Basic information

LNCipedia transcript ID: PAN3-AS1:6 
LNCipedia gene ID: PAN3-AS1
Location (hg38): chr13:28132305-28139093
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6648 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261485.1|HBMT00000391731.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.1646 non-coding 
CPAT coding probability 68.11% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PAN3-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PAN3-AS1:6
5.0 PAN3-AS1:6
5.1 PAN3-AS1:6
5.2 PAN3-AS1:6