Transcript: PAQR9-AS1:10

Basic information

LNCipedia transcript ID: PAQR9-AS1:10 
HGNC Gene Symbol: PAQR9-AS1    
HGNC Full Gene Name: PAQR9 antisense RNA 1
Ensembl Gene ID: ENSG00000241570
Ensembl Transcript ID: ENST00000478823
Location (hg38): chr3:142964160-142964903
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 610 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000478823.1; RP11-372E1.6-003; OTTHUMT00000354542.1; NONHSAT092508
Alternative gene names: ENSG00000241570.2; RP11-372E1.6; OTTHUMG00000159316.1; ENSG00000241570.4; ENSG00000241570.8; PAQR9-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.4657 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PAQR9-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-U2SURP-2:2
4.0 PAQR9-AS1:10
4.1 PAQR9-AS1:10
5.0 PAQR9-AS1:10
5.1 PAQR9-AS1:10
5.2 PAQR9-AS1:10