Transcript: PARD6G-AS1:2

Basic information

LNCipedia transcript ID: PARD6G-AS1:2 
HGNC Gene Symbol: PARD6G-AS1    
HGNC Full Gene Name: PARD6G antisense RNA 1
RefSeq ID: NR_028339
Location (hg38): chr18:80147924-80171733
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3334 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000424835; NR_028339; NR_028339.1
Alternative gene names: ENSG00000226924; AC139100.1; ; PARD6G-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.81 non-coding 
CPAT coding probability 21.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PARD6G-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADNP2-1:1
3.1 lnc-ADNP2-1:1
4.0 PARD6G-AS1:2
4.1 PARD6G-AS1:2
5.0 PARD6G-AS1:2
5.1 PARD6G-AS1:2
5.2 PARD6G-AS1:2