Transcript: PARD6G-AS1:5

Basic information

LNCipedia transcript ID: PARD6G-AS1:5 
LNCipedia gene ID: PARD6G-AS1
Ensembl Gene ID: ENSG00000267270
Ensembl Transcript ID: ENST00000586421
Location (hg38): chr18:80147925-80171733
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3333 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000586421.1
Alternative gene names: ENSG00000267270.5; PARD6G-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 29.81 non-coding 
CPAT coding probability 21.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PARD6G-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PARD6G-AS1:5
4.1 PARD6G-AS1:5
5.0 PARD6G-AS1:5
5.1 PARD6G-AS1:5
5.2 PARD6G-AS1:5