Transcript: PCAT18:1
Basic information
LNCipedia transcript ID: PCAT18:1
HGNC Gene Symbol: PCAT18
HGNC Full Gene Name:
prostate cancer associated transcript 18
Ensembl Gene ID:
ENSG00000265369
Ensembl Transcript ID:
ENST00000579458
RefSeq ID:
NR_024259
Location (hg38): chr18:26687621-26703638
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2598 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000579458.1; RP11-17A19.1-001; OTTHUMT00000446446.1; NONHSAT058756; NR_024259; NR_024259.1
Alternative gene names: ENSG00000265369.1; RP11-17A19.1; OTTHUMG00000179450.1; ENSG00000265369.2; U3; ENSG00000265369.3; PCAT18; LINC01092
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
PCAT18:1 | no | no | no | no |
Available literature
- Crea (2014), Identification of a long non-coding RNA as a novel biomarker and potential therapeutic target for metastatic prostate cancer., Oncotarget
- Hu (2014), Long noncoding RNA GAPLINC regulates CD44-dependent cell invasiveness and associates with poor prognosis of gastric cancer., Cancer Res.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
3.1 | lnc-KCTD1-1:1 |
4.0 | PCAT18:1 |
4.1 | PCAT18:1 |
5.0 | PCAT18:1 |
5.1 | PCAT18:1 |
5.2 | PCAT18:1 |