Transcript: PCCA-AS1:4

Basic information

LNCipedia transcript ID: PCCA-AS1:4 
LNCipedia gene ID: PCCA-AS1
RefSeq ID: NR_047686
Location (hg38): chr13:100464437-100481015
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 463 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT034960; NR_047686; NR_047686.1
Alternative gene names: ; PCCA-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.5176 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PCCA-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-A2LD1-1:5
4.0 PCCA-AS1:4
4.1 PCCA-AS1:4
5.0 PCCA-AS1:4
5.1 PCCA-AS1:4
5.2 PCCA-AS1:4