Transcript: PCF11-AS1:17

Basic information

LNCipedia transcript ID: PCF11-AS1:17 
LNCipedia gene ID: PCF11-AS1
Location (hg38): chr11:83192137-83193663
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 877 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247137.4|ENST00000500634.2
Alternative gene names: ENST00000602322.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.9922 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PCF11-AS1:17 no no no no

Available literature

  1. Liu (2015), Expression Signatures of Long Noncoding RNAs in Adolescent Idiopathic Scoliosis., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PCF11-AS1:17
5.0 PCF11-AS1:17
5.1 PCF11-AS1:17
5.2 PCF11-AS1:17