Transcript: PCF11-AS1:5

Basic information

LNCipedia transcript ID: PCF11-AS1:5 
LNCipedia gene ID: PCF11-AS1
Location (hg38): chr11:83192099-83193624
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 452 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT023397
Alternative gene names: ENST00000602322.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -414.061 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PCF11-AS1:5 no no no no

Available literature

  1. Liu (2015), Expression Signatures of Long Noncoding RNAs in Adolescent Idiopathic Scoliosis., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC90B-2:9
4.0 PCF11-AS1:5
4.1 PCF11-AS1:5
5.0 PCF11-AS1:5
5.1 PCF11-AS1:5
5.2 PCF11-AS1:5