Transcript: PDCD4-AS1:6

Basic information

LNCipedia transcript ID: PDCD4-AS1:6 
LNCipedia gene ID: PDCD4-AS1
Location (hg38): chr10:110868743-110872224
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2141 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203497.2|ENCT00000060302.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.1929 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PDCD4-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PDCD4-AS1:6
5.0 PDCD4-AS1:6
5.1 PDCD4-AS1:6
5.2 PDCD4-AS1:6