Transcript: PDYN-AS1:10

Basic information

LNCipedia transcript ID: PDYN-AS1:10 
LNCipedia gene ID: PDYN-AS1
Location (hg38): chr20:1945421-1947171
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1751 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233896.1|FTMT28000000071.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.8034 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PDYN-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIRPA-2:2
5.0 lnc-SIRPA-2:2
5.1 PDYN-AS1:2
5.2 PDYN-AS1:10