Transcript: PDYN-AS1:11

Basic information

LNCipedia transcript ID: PDYN-AS1:11 
LNCipedia gene ID: PDYN-AS1
Location (hg38): chr20:1946967-1948577
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1611 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233896.1|MICT00000212612.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -55.6413 non-coding 
CPAT coding probability 8.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PDYN-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIRPA-2:3
5.0 lnc-SIRPA-2:3
5.1 PDYN-AS1:3
5.2 PDYN-AS1:11