Transcript: PDZRN3-AS1:7

Basic information

LNCipedia transcript ID: PDZRN3-AS1:7 
LNCipedia gene ID: PDZRN3-AS1
Location (hg38): chr3:73623647-73627867
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2775 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT090482
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.1232 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PDZRN3-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP4R2-1:4
4.0 PDZRN3-AS1:7
4.1 PDZRN3-AS1:7
5.0 PDZRN3-AS1:7
5.1 PDZRN3-AS1:7
5.2 PDZRN3-AS1:7