Transcript: PHEX-AS1:1

Basic information

LNCipedia transcript ID: PHEX-AS1:1 
HGNC Gene Symbol: PHEX-AS1    
HGNC Full Gene Name: PHEX antisense RNA 1
Ensembl Gene ID: ENSG00000224204
Ensembl Transcript ID: ENST00000424650
Location (hg38): chrX:22162733-22172983
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1906 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000424650.1; PHEX-AS1-001; OTTHUMT00000056034.1
Alternative gene names: ENSG00000224204.1; PHEX-AS1; OTTHUMG00000021240.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.5954 non-coding 
CPAT coding probability 2.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PHEX-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMPX-1:1
4.0 PHEX-AS1:1
4.1 PHEX-AS1:1
5.0 PHEX-AS1:1
5.1 PHEX-AS1:1
5.2 PHEX-AS1:1