Transcript: PIK3CD-AS2:12

Basic information

LNCipedia transcript ID: PIK3CD-AS2:12 
LNCipedia gene ID: PIK3CD-AS2
Location (hg38): chr1:9679232-9687564
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1836 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231789.2|MICT00000002823.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.4754 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PIK3CD-AS2:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PIK3CD-AS2:12
5.0 PIK3CD-AS2:12
5.1 PIK3CD-AS2:12
5.2 PIK3CD-AS2:12