Transcript: PIK3CD-AS2:2

Basic information

LNCipedia transcript ID: PIK3CD-AS2:2 
LNCipedia gene ID: PIK3CD-AS2
RefSeq ID: NR_126367
Location (hg38): chr1:9672426-9687574
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 534 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126367; NR_126367.1
Alternative gene names: ; PIK3CD-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.3585 non-coding 
CPAT coding probability 2.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PIK3CD-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf200-1:6
4.0 PIK3CD-AS2:2
4.1 PIK3CD-AS2:2
5.0 PIK3CD-AS2:2
5.1 PIK3CD-AS2:2
5.2 PIK3CD-AS2:2