Transcript: PIK3CD-AS2:5

Basic information

LNCipedia transcript ID: PIK3CD-AS2:5 
LNCipedia gene ID: PIK3CD-AS2
Location (hg38): chr1:9672428-9687569
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 951 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT000814
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.3585 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PIK3CD-AS2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf200-1:3
4.0 PIK3CD-AS2:5
4.1 PIK3CD-AS2:5
5.0 PIK3CD-AS2:5
5.1 PIK3CD-AS2:5
5.2 PIK3CD-AS2:5