Transcript: PINCR:7

Basic information

LNCipedia transcript ID: PINCR:7 
LNCipedia gene ID: PINCR
Location (hg38): chrX:43197018-43210602
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 732 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT136768; FPKM1_group_34475_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.8215 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PINCR:7 no no no no

Available literature

  1. Chaudhary (2017), Prosurvival long noncoding RNA <i>PINCR</i> regulates a subset of p53 targets in human colorectal cancer cells by binding to Matrin 3., Elife


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAOA-3:3
4.0 lnc-MAOA-3:3
4.1 lnc-MAOA-3:3
5.0 lnc-MAOA-3:3
5.1 PINCR:4
5.2 PINCR:7