Transcript: PLCE1-AS1:13

Basic information

LNCipedia transcript ID: PLCE1-AS1:13 
LNCipedia gene ID: PLCE1-AS1
Location (hg38): chr10:94269280-94277060
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1408 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_3992_NR_033969
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.7605 non-coding 
CPAT coding probability 1.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCE1-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC3L-6:1
4.0 lnc-NOC3L-6:1
4.1 PLCE1-AS1:13
5.0 PLCE1-AS1:13
5.1 PLCE1-AS1:13
5.2 PLCE1-AS1:13