Transcript: PLCE1-AS1:5

Basic information

LNCipedia transcript ID: PLCE1-AS1:5 
HGNC Gene Symbol: PLCE1-AS1    
HGNC Full Gene Name: PLCE1 antisense RNA 1
Ensembl Gene ID: ENSG00000268894
Ensembl Transcript ID: ENST00000425267
Location (hg38): chr10:94279305-94287047
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1370 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425267.3; ENST00000425267.7
Alternative gene names: ENSG00000268894.2; PLCE1-AS1; ENSG00000268894.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.6776 non-coding 
CPAT coding probability 11.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCE1-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC3L-1:5
4.0 PLCE1-AS1:5
4.1 PLCE1-AS1:5
5.0 PLCE1-AS1:5
5.1 PLCE1-AS1:5
5.2 PLCE1-AS1:5