Transcript: PLCE1-AS1:7

Basic information

LNCipedia transcript ID: PLCE1-AS1:7 
LNCipedia gene ID: PLCE1-AS1
Location (hg38): chr10:94280006-94283461
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 437 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000425267.1; RP11-76P2.2-001; OTTHUMT00000049464.1
Alternative gene names: ENSG00000241714.1; RP11-76P2.2; OTTHUMG00000018786.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.0788 non-coding 
CPAT coding probability 10.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCE1-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC3L-1:2
4.0 PLCE1-AS1:7
4.1 PLCE1-AS1:7
5.0 PLCE1-AS1:7
5.1 PLCE1-AS1:7
5.2 PLCE1-AS1:7