Transcript: PLCE1-AS2:15

Basic information

LNCipedia transcript ID: PLCE1-AS2:15 
LNCipedia gene ID: PLCE1-AS2
Location (hg38): chr10:94100496-94107872
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 458 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000419353.1; RP11-429H9.4-004; OTTHUMT00000049460.1; NONHSAT015705
Alternative gene names: ENSG00000232913.1; RP11-429H9.4; OTTHUMG00000018783.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.7235 non-coding 
CPAT coding probability 3.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCE1-AS2:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC3L-3:5
4.0 PLCE1-AS2:15
4.1 PLCE1-AS2:15
5.0 PLCE1-AS2:15
5.1 PLCE1-AS2:15
5.2 PLCE1-AS2:15