Transcript: PLCE1-AS2:9

Basic information

LNCipedia transcript ID: PLCE1-AS2:9 
HGNC Gene Symbol: PLCE1-AS2    
HGNC Full Gene Name: PLCE1 antisense RNA 2
Ensembl Gene ID: ENSG00000232913
Ensembl Transcript ID: ENST00000438899
Location (hg38): chr10:94081950-94108780
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 945 bp
Exons: 8
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000438899.1; RP11-429H9.4-001; OTTHUMT00000049457.1; ENST00000438899.5
Alternative gene names: ENSG00000232913.1; RP11-429H9.4; OTTHUMG00000018783.1; ENSG00000232913.3; ENSG00000232913.7; PLCE1-AS2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.7759 non-coding 
CPAT coding probability 68.77% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PLCE1-AS2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC3L-3:2
4.0 PLCE1-AS2:9
4.1 PLCE1-AS2:9
5.0 PLCE1-AS2:9
5.1 PLCE1-AS2:9
5.2 PLCE1-AS2:9