Transcript: PLCG1-AS1:2

Basic information

LNCipedia transcript ID: PLCG1-AS1:2 
LNCipedia gene ID: PLCG1-AS1
RefSeq ID: NR_109889
Location (hg38): chr20:41097994-41138000
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1794 bp
Exons: 7
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109889; NR_109889.1
Alternative gene names: TOP1-AS1; PLCG1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.5144 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCG1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZHX3-1:3
4.0 PLCG1-AS1:2
4.1 PLCG1-AS1:2
5.0 PLCG1-AS1:2
5.1 PLCG1-AS1:2
5.2 PLCG1-AS1:2