Transcript: PLS3-AS1:9

Basic information

LNCipedia transcript ID: PLS3-AS1:9 
LNCipedia gene ID: PLS3-AS1
Location (hg38): chrX:115520484-115562703
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 517 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271826.1|ENST00000606397.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.8309 non-coding 
CPAT coding probability 4.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLS3-AS1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PLS3-AS1:9
5.0 PLS3-AS1:9
5.1 PLS3-AS1:9
5.2 PLS3-AS1:9