Transcript: POLH-AS1:3

Basic information

LNCipedia transcript ID: POLH-AS1:3 
HGNC Gene Symbol: POLH-AS1    
HGNC Full Gene Name: POLH antisense RNA 1
Ensembl Gene ID: ENSG00000203362
Ensembl Transcript ID: ENST00000417591
Location (hg38): chr6:43588230-43591362
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 990 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000417591.1; RP3-337H4.8-001; OTTHUMT00000040656.1; NONHSAT112904
Alternative gene names: ENSG00000203362.2; RP3-337H4.8; OTTHUMG00000014741.1; AL355802.1; POLH-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.4524 non-coding 
CPAT coding probability 3.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POLH-AS1:3 yes no no no

Available literature

  1. Soibam (2017), Super-lncRNAs: identification of lncRNAs that target super-enhancers via RNA:DNA:DNA triplex formation., RNA


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XPO5-1:1
4.0 lnc-XPO5-1:1
4.1 lnc-XPO5-1:1
5.0 lnc-XPO5-1:1
5.1 POLH-AS1:2
5.2 POLH-AS1:3