Transcript: POT1-AS1:10

Basic information

LNCipedia transcript ID: POT1-AS1:10 
LNCipedia gene ID: POT1-AS1
Location (hg38): chr7:124998270-125001070
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 524 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013576; NONHSAT123097
Alternative gene names: XLOC_006231; linc-ARF5-8;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.286 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POT1-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SPAM1-4:6
3.1 lnc-SPAM1-4:6
4.0 POT1-AS1:10
4.1 POT1-AS1:10
5.0 POT1-AS1:10
5.1 POT1-AS1:10
5.2 POT1-AS1:10