Transcript: POT1-AS1:11

Basic information

LNCipedia transcript ID: POT1-AS1:11 
LNCipedia gene ID: POT1-AS1
Location (hg38): chr7:125099356-125138661
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT123098
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -212.0761 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POT1-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPAM1-4:9
4.0 POT1-AS1:11
4.1 POT1-AS1:11
5.0 POT1-AS1:11
5.1 POT1-AS1:11
5.2 POT1-AS1:11