Transcript: POT1-AS1:26

Basic information

LNCipedia transcript ID: POT1-AS1:26 
LNCipedia gene ID: POT1-AS1
RefSeq ID: NR_125719
Location (hg38): chr7:124929873-125145234
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3280 bp
Exons: 8
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125719.1
Alternative gene names: POT1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -109.9155 non-coding 
CPAT coding probability 8.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POT1-AS1:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 POT1-AS1:26
5.1 POT1-AS1:26
5.2 POT1-AS1:26