Transcript: POTEH-AS1:1

Basic information

LNCipedia transcript ID: POTEH-AS1:1 
HGNC Gene Symbol: POTEH-AS1    
HGNC Full Gene Name: POTEH antisense RNA 1
Ensembl Gene ID: ENSG00000236666
Ensembl Transcript ID: ENST00000422014
Location (hg38): chr22:15699361-15703403
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2566 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000422014.1; POTEH-AS1-001; OTTHUMT00000276920.1; NONHSAT083102
Alternative gene names: ENSG00000236666.1; POTEH-AS1; OTTHUMG00000140316.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.3146 non-coding 
CPAT coding probability 4.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POTEH-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RA-8:1
4.0 POTEH-AS1:1
4.1 POTEH-AS1:1
5.0 POTEH-AS1:1
5.1 POTEH-AS1:1
5.2 POTEH-AS1:1