Transcript: POU6F2-AS2:1

Basic information

LNCipedia transcript ID: POU6F2-AS2:1 
LNCipedia gene ID: POU6F2-AS2
Location (hg38): chr7:38979895-39013568
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2337 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT120194
Alternative gene names: FLJ12971


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.7938 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POU6F2-AS2:1 yes no no no

Available literature

  1. Liu (2016), Long noncoding RNA POU6F2-AS2 is associated with oesophageal squamous cell carcinoma., J. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VPS41-1:2
4.0 POU6F2-AS2:1
4.1 POU6F2-AS2:1
5.0 POU6F2-AS2:1
5.1 POU6F2-AS2:1
5.2 POU6F2-AS2:1