Transcript: POU6F2-AS2:3

Basic information

LNCipedia transcript ID: POU6F2-AS2:3 
LNCipedia gene ID: POU6F2-AS2
Location (hg38): chr7:38979895-39006625
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6337 bp
Exons: 5
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1260:1
Alternative gene names: FLJ12971


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.5343 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POU6F2-AS2:3 yes no no no

Available literature

  1. Liu (2016), Long noncoding RNA POU6F2-AS2 is associated with oesophageal squamous cell carcinoma., J. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 POU6F2-AS2:3
4.1 POU6F2-AS2:3
5.0 POU6F2-AS2:3
5.1 POU6F2-AS2:3
5.2 POU6F2-AS2:3