Transcript: PPEF1-AS1:1

Basic information

LNCipedia transcript ID: PPEF1-AS1:1 
LNCipedia gene ID: PPEF1-AS1
Location (hg38): chrX:18688644-18692687
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 491 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046642
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.0627 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PPEF1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RS1-1:2
4.0 PPEF1-AS1:1
4.1 PPEF1-AS1:1
5.0 PPEF1-AS1:1
5.1 PPEF1-AS1:1
5.2 PPEF1-AS1:1