Transcript: PPP1R26-AS1:10

Basic information

LNCipedia transcript ID: PPP1R26-AS1:10 
LNCipedia gene ID: PPP1R26-AS1
Location (hg38): chr9:135462715-135469089
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3138 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1433:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.6 non-coding 
CPAT coding probability 2.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PPP1R26-AS1:10 no no no no

Available literature

  1. Xu (2017), Oncogenic long noncoding RNA landscape in breast cancer., Mol. Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PPP1R26-AS1:10
4.1 PPP1R26-AS1:10
5.0 PPP1R26-AS1:10
5.1 PPP1R26-AS1:10
5.2 PPP1R26-AS1:10