Transcript: PRKAR2A-AS1:11

Basic information

LNCipedia transcript ID: PRKAR2A-AS1:11 
LNCipedia gene ID: PRKAR2A-AS1
Location (hg38): chr3:48847964-48848449
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 407 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00006016
Alternative gene names: XLOC_002643; linc-ARIH2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.9851 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PRKAR2A-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARIH2-1:4
3.1 lnc-ARIH2-1:6
4.0 PRKAR2A-AS1:11
4.1 PRKAR2A-AS1:11
5.0 PRKAR2A-AS1:11
5.1 PRKAR2A-AS1:11
5.2 PRKAR2A-AS1:11