Transcript: PROX1-AS1:11

Basic information

LNCipedia transcript ID: PROX1-AS1:11 
LNCipedia gene ID: PROX1-AS1
Location (hg38): chr1:213822288-213987649
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 505 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT009432
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.9891 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN14-3:9
4.0 PROX1-AS1:11
4.1 PROX1-AS1:11
5.0 PROX1-AS1:11
5.1 PROX1-AS1:11
5.2 PROX1-AS1:11