Transcript: PROX1-AS1:19

Basic information

LNCipedia transcript ID: PROX1-AS1:19 
LNCipedia gene ID: PROX1-AS1
Ensembl Gene ID: ENSG00000274895
Ensembl Transcript ID: ENST00000610409
Location (hg38): chr1:213983793-213986419
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2627 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610409.1
Alternative gene names: ENSG00000274895.1; RP11-478J18.2; ; AC011700.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.3542 non-coding 
CPAT coding probability 11.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PROX1-AS1:19
4.1 PROX1-AS1:19
5.0 PROX1-AS1:19
5.1 PROX1-AS1:19
5.2 PROX1-AS1:19