Transcript: PROX1-AS1:48

Basic information

LNCipedia transcript ID: PROX1-AS1:48 
LNCipedia gene ID: PROX1-AS1
Location (hg38): chr1:213822288-213915979
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 498 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT009433
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.3288 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:48 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN14-3:22
4.0 PROX1-AS1:48
4.1 PROX1-AS1:48
5.0 PROX1-AS1:48
5.1 PROX1-AS1:48
5.2 PROX1-AS1:48