Transcript: PROX1-AS1:61

Basic information

LNCipedia transcript ID: PROX1-AS1:61 
LNCipedia gene ID: PROX1-AS1
Location (hg38): chr1:213819942-213822342
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 840 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT009430
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.4612 non-coding 
CPAT coding probability 12.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:61 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN14-3:30
4.0 PROX1-AS1:61
4.1 PROX1-AS1:61
5.0 PROX1-AS1:61
5.1 PROX1-AS1:61
5.2 PROX1-AS1:61