Transcript: PRR29-AS1:2

Basic information

LNCipedia transcript ID: PRR29-AS1:2 
HGNC Gene Symbol: PRR29-AS1    
HGNC Full Gene Name: PRR29 antisense RNA 1
Ensembl Gene ID: ENSG00000264954
Ensembl Transcript ID: ENST00000577545
Location (hg38): chr17:63996470-63998931
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 889 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577545.1; RP11-214C8.2-002; OTTHUMT00000442608.1; NONHSAT055256
Alternative gene names: ENSG00000264954.1; RP11-214C8.2; OTTHUMG00000178593.1; PRR29-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.1926 non-coding 
CPAT coding probability 3.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PRR29-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ICAM2-1:2
4.0 PRR29-AS1:2
4.1 PRR29-AS1:2
5.0 PRR29-AS1:2
5.1 PRR29-AS1:2
5.2 PRR29-AS1:2