Transcript: PRR34-AS1:6

Basic information

LNCipedia transcript ID: PRR34-AS1:6 
HGNC Gene Symbol: PRR34-AS1    
HGNC Full Gene Name: PRR34 antisense RNA 1
Ensembl Gene ID: ENSG00000241990
Ensembl Transcript ID: ENST00000445441
Location (hg38): chr22:46054915-46057210
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 287 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445441.1; RP6-109B7.3-003; OTTHUMT00000316786.1; NONHSAT087273
Alternative gene names: ENSG00000241990.1; RP6-109B7.3; OTTHUMG00000150198.2; ENSG00000241990.5; PRR34-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -271.186 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PRR34-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPARA-3:3
4.0 lnc-RP4-695O20__B.10.1-3:6
4.1 lnc-RP4-695O20__B.10.1-3:6
5.0 lnc-RP4-695O20__B.10.1-3:6
5.1 PRR34-AS1:3
5.2 PRR34-AS1:6