Transcript: PRR34-AS1:7

Basic information

LNCipedia transcript ID: PRR34-AS1:7 
LNCipedia gene ID: PRR34-AS1
Location (hg38): chr22:46056492-46057202
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 595 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087275
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
CAVTDTSFR 92.3076923076923% antisense-1
Lee translation initiation sites 1 non-coding 
PhyloCSF score -271.186 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PRR34-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPARA-3:5
4.0 lnc-RP4-695O20__B.10.1-3:7
4.1 lnc-RP4-695O20__B.10.1-3:7
5.0 lnc-RP4-695O20__B.10.1-3:7
5.1 PRR34-AS1:4
5.2 PRR34-AS1:7