Transcript: PRR7-AS1:8

Basic information

LNCipedia transcript ID: PRR7-AS1:8 
LNCipedia gene ID: PRR7-AS1
Location (hg38): chr5:177442813-177455797
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 11018 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000246334.2|MICT00000294305.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.5628 non-coding 
CPAT coding probability 69.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PRR7-AS1:8 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PRR7-AS1:8
5.0 PRR7-AS1:8
5.1 PRR7-AS1:8
5.2 PRR7-AS1:8