Transcript: PSD2-AS1:13

Basic information

LNCipedia transcript ID: PSD2-AS1:13 
LNCipedia gene ID: PSD2-AS1
Location (hg38): chr5:139741349-139746250
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 439 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249131.1|ENST00000515306.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -147.8232 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PSD2-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NRG2-3:7
5.0 lnc-NRG2-3:7
5.1 PSD2-AS1:4
5.2 PSD2-AS1:13