Transcript: PSD2-AS1:14

Basic information

LNCipedia transcript ID: PSD2-AS1:14 
LNCipedia gene ID: PSD2-AS1
Location (hg38): chr5:139740964-139746232
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1093 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT104124
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.8232 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PSD2-AS1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRG2-3:3
4.0 lnc-NRG2-3:3
4.1 lnc-NRG2-3:3
5.0 lnc-NRG2-3:3
5.1 PSD2-AS1:5
5.2 PSD2-AS1:14