Transcript: PSG8-AS1:4

Basic information

LNCipedia transcript ID: PSG8-AS1:4 
HGNC Gene Symbol: PSG8-AS1    
HGNC Full Gene Name: PSG8 antisense RNA 1
Ensembl Gene ID: ENSG00000225877
Ensembl Transcript ID: ENST00000425668
RefSeq ID: NR_036584
Location (hg38): chr19:42821863-42826878
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1873 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000425668; ENST00000425668.1; AC004603.4-001; OTTHUMT00000323091.1; NONHSAT066568; NR_036584; NR_036584.1
Alternative gene names: ENSG00000225877; AC004603.4; ENSG00000225877.1; OTTHUMG00000151551.1; PSG8-AS1; LOC100289650


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 44.7712 non-coding 
CPAT coding probability 18.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PSG8-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC011497.1-1:1
3.1 lnc-AC011497.1-1:1
4.0 lnc-AC011497.1-1:1
4.1 lnc-AC011497.1-1:1
5.0 lnc-AC011497.1-1:1
5.1 PSG8-AS1:2
5.2 PSG8-AS1:4